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Table 1 List of inflammatory genes. Given are accession numbers of genes, fold changes and p-values between the group of older and young donors, a Pearson correlation coefficient (R) expressing similarity to the NF-κB profile as seen in Figure 1, and a description of genes.

From: Cell autonomous expression of inflammatory genes in biologically aged fibroblasts associated with elevated NF-kappaB activity

Accession ID

Fold

p

R

Description

NM_001733

2.3

0.023

0.74

complement component 1, r subcomponent (C1R)

NM_005438

2.0

0.033

0.71

FOS-like antigen 1 (FOSL1)

NM_000732

2.0

0.012

0.69

CD3D antigen, delta polypeptide (TiT3 complex) (CD3D)

NM_000586

4.6

0.020

0.68

interleukin 2 (IL2)

NM_004591

2.0

0.068

0.65

chemokine (C-C motif) ligand 20 (CCL20)

NM_005218

2.1

0.066

0.61

defensin, beta 1 (DEFB1)

NM_002993

2.0

0.097

0.58

chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2) (CXCL6)

NM_003034

2.8

0.040

0.58

sialyltransferase 8A (GD3 synthase) (SIAT8A)

NM_002127

3.5

0.104

0.56

HLA-G histocompatibility antigen, class I, G (HLA-G)

NM_006644

2.6

0.102

0.52

heat shock 105 kDa/110 kDa protein 1 (HSPH1)

NM_080741

6.1

0.093

0.49

sialidase 4 (NEU4)

NM_002089

2.4

0.020

0.46

chemokine (C-X-C motif) ligand 2 (CXCL2)

NM_001928

5.6

0.094

0.45

D component of complement (adipsin) (DF)

NM_001937

2.2

0.017

0.41

dermatopontin (DPT)

NM_000634

4.3

0.068

0.39

interleukin 8 receptor, alpha (IL8RA)

NM_004887

3.5

0.047

0.38

chemokine (C-X-C motif) ligand 14 (CXCL14)

NM_024298

6.8

0.023

0.30

leukocyte receptor cluster (LRC) member 4 (LENG4)

NM_002416

3.6

0.068

0.22

chemokine (C-X-C motif) ligand 9 (CXCL9)

NM_006573

3.3

0.040

0.17

tumor necrosis factor (ligand) superfamily, member 13b (TNFSF13B)

NM_000575

2.7

0.033

0.17

interleukin 1, alpha (IL1A)

NM_003641

2.0

0.088

0.13

interferon induced transmembrane protein 1 (9–27) (IFITM1)

NM_000888

3.2

0.042

0.09

integrin, beta 6 (ITGB6)

NM_005521

2.0

0.094

0.06

T-cell leukemia, homeobox 1 (TLX1)

NM_004031

2.0

0.064

0.05

interferon regulatory factor 7 (IRF7), transcript variant d

NM_000716

2.2

0.085

0.05

complement component 4 binding protein, beta (C4BPB)

NM_007112

4.7

0.073

0.04

thrombospondin 3 (THBS3)

NM_182764

3.4

0.061

0.04

engulfment and cell motility 2 (ELMO2), transcript variant 3

NM_207517

2.7

0.041

0.01

ADAMTS-like 3 (ADAMTSL3)

NM_148962

4.8

0.083

-0.03

oxoeicosanoid (OXE) receptor 1 (OXER1)

NM_002427

5.1

0.093

-0.11

matrix metalloproteinase 13 (collagenase 3) (MMP13)

NM_000570

3.3

0.094

-0.15

Fc fragment of IgG, low affinity IIIb, receptor for (CD16) (FCGR3B)

NM_000577

2.7

0.116

-0.19

interleukin 1 receptor antagonist (IL1RN), transcript variant 3

NM_000603

2.4

0.088

-0.21

nitric oxide synthase 3 (endothelial cell) (NOS3)

NM_002177

2.3

0.127

-0.33

interferon, omega 1 (IFNW1)